Next Generation Sequencing in South Africa | CPGR

Next Generation Sequencing

Pioneering Genomics with Next Generation Sequencing

In the ever-evolving world of genomics, Next Generation Sequencing (NGS) is driving a revolution. At CPGR, we offer cutting-edge NGS and Long Read Sequencing solutions tailored for research institutions, medical labs, and biotech firms across South Africa.

Our goal? To empower scientists, clinicians, and innovators with accurate, high-throughput data, helping to decode life at the molecular level.

What is Next Generation Sequencing (NGS)?

NGS refers to highly parallelised DNA and RNA sequencing technologies that deliver millions of reads in a single run. Compared to traditional Sanger sequencing, NGS is faster, more scalable, and more cost-effective.

Whether you’re analysing rare variants, gene expression, or microbial genomes, Next Generation Sequencing can transform your scientific workflow.

Why Choose Long Read Sequencing?

While short-read sequencing has long been the standard, Long Read Sequencing provides greater accuracy when dealing with:

  • Structural variations
  • Complex genomic regions
  • Full-length transcriptomes

At CPGR, we integrate Long Read Sequencing platforms such as PacBio and Oxford Nanopore to complement NGS services, offering complete genomic insights in South Africa.

NGS Applications Across South Africa’s Sectors

Healthcare and Diagnostics

In South Africa, NGS, Next Generation Sequencing, is changing clinical diagnostics. From inherited diseases to oncology, clinicians rely on NGS for:

  • Rare disease detection
  • Cancer mutation profiling
  • Carrier screening and prenatal testing

With CPGR, clinicians can access robust data with fast turnaround times.

Agrigenomics and Biodiversity

South Africa’s rich biodiversity is a treasure for scientists. With Next Generation Sequencing, researchers can decode genomes of indigenous species, track agricultural traits, and monitor conservation genetics.

Long Read Sequencing also allows de novo genome assemblies, crucial for studying species without reference genomes.

Microbiome and Infectious Disease Research

Whether it’s tuberculosis, HIV, or COVID-19, NGS is pivotal in pathogen surveillance. NGS helps track mutations, discover resistance genes, and develop targeted treatments.

Why CPGR is South Africa’s Genomic Partner of Choice

State-of-the-art Facilities

Located in Cape Town, CPGR houses advanced laboratories equipped with Illumina, PacBio, and Oxford Nanopore platforms. Whether you’re sequencing single cells or whole genomes, we ensure high-quality data at global standards.

Expert Team

Our bioinformaticians and molecular biologists are highly trained in NGS workflows, including library preparation, quality control, and post-sequencing analysis.

Flexible Service Options

From whole genome sequencing to targeted panels, CPGR offers customizable services to fit your research or clinical needs. We support:

  • Whole Exome Sequencing (WES)
  • RNA-Seq
  • Amplicon sequencing
  • De novo assembly with Long Read Sequencing

How We Ensure Quality in NGS Data

Robust Quality Control

Each NGS project includes rigorous quality checks, base calling metrics, and contamination control.

Advanced Bioinformatics

Our integrated pipelines deliver clean, annotated data. From variant calling to differential expression, CPGR’s analytics support actionable results.

NGS in South Africa: Local Support, Global Reach

Choosing CPGR means partnering with a team that understands both the local scientific landscape and international standards. We collaborate with universities, hospitals, and private labs across South Africa to make Next Generation Sequencing more accessible and impactful.

Future of Genomics with CPGR

As the demand for personalised medicine, crop improvement, and pathogen tracking grows, NGS will continue to shape the future of science and healthcare.

We’re not just offering a service—we’re building a genomics ecosystem in South Africa, powered by Next Generation Sequencing and Long Read Sequencing innovations.

Get Started with CPGR Today

Interested in accelerating your research or clinical diagnostics with NGS?

Partner with CPGR, South Africa’s trusted genomics provider. Contact us for consultations, project quotes, or customised sequencing plans.

Conclusion: Driving Genomics Forward in South Africa

At CPGR, we don’t just perform sequencing, we empower discoveries. Whether you’re in Johannesburg, Cape Town, Durban, or anywhere in South Africa, our Next Generation Sequencing and Long Read Sequencing services help bridge the gap between research and real-world impact.

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